Add: Tomcat, Solr, Fedora Docker files && basic config

Dockerfile

@@ -13,8 +13,9 @@ RUN apt install -y \
 	php5.6-gd php5.6-curl php5.6-mcrypt php5.6-imagick php5.6-json php5.6-xsl php5.6-mysql php5.6-apcu php5.6-common
 
 RUN a2enmod proxy*
+RUN a2enmod rewrite
 
-COPY data/ /var/www/2017.artxibo.arteleku.net/
+COPY server/data/ /var/www/2017.artxibo.arteleku.net/
 
 RUN chown -R www-data:www-data /var/www/
 

README.md

@@ -28,5 +28,26 @@ docker-compose up -d
 
 docker exec -i <container_id> mysql -u<mysql-user> -p<mysql-pass> <mysql-database> < database.dump.sql
 
+## Config Drupal
+
+/sites/default/
+
+$databases = array (
+....
+	database => 'name',
+	username => user
+	password => pass
+	host => host
+)
+$base_url = "http://myhost.drupal.net";
+
+## Config Islandora
+
+### Configure Solr
+
+/es/user/3#overlay=es/admin/islandora/search/islandora_solr
+
+Server: 172.17.0.1:8080/solr
+
 
 

Solr.Dockerfile

@@ -0,0 +1,6 @@
+FROM solr:8
+
+USER solr
+
+COPY config/schema.xml /var/solr/data/collection1/conf/schema.xml
+COPY config/solrconfig.xml /var/solr/data/collection1/conf/solrconfig.xml

Tomcat.Dockerfile

@@ -0,0 +1,45 @@
+FROM debian:stable-slim
+
+ENV TOMCAT_TARBALL_LINK https://dlcdn.apache.org/tomcat/tomcat-9/v9.0.68/bin/apache-tomcat-9.0.68.tar.gz
+ENV TOMCAT_DIRECTORY apache-tomcat-9.0.68
+
+RUN apt-get update && apt-get dist-upgrade -y
+
+RUN apt-get -y install openjdk-11-jdk openjdk-11-jre
+
+RUN addgroup tomcat
+RUN adduser tomcat --ingroup tomcat --home /opt/tomcat --shell /usr/bin
+
+RUN apt-get -y install wget
+
+RUN wget -O /tmp/tomcat.tar.gz $TOMCAT_TARBALL_LINK
+RUN tar -zxvf /tmp/tomcat.tar.gz
+
+WORKDIR /opt/tomcat
+RUN mv /$TOMCAT_DIRECTORY/* /opt/tomcat/
+
+RUN chown -R tomcat:tomcat /opt/tomcat
+
+COPY fcrepo/setenv.sh /opt/tomcat/bin/setenv.sh
+
+COPY fcrepo/tomcat.service /etc/systemd/system/tomcat.service
+
+## Fedora
+
+COPY fcrepo/i8_namespaces.cnd /opt/fcrepo/config/i8_namespaces.cnd
+COPY fcrepo/allowed_hosts.txt /opt/fcrepo/config/allowed_hosts.txt
+COPY fcrepo/repository.json /opt/fcrepo/config/repository.json
+COPY fcrepo/fcrepo-config.xml /opt/fcrepo/config/fcrepo-config.xml
+COPY fcrepo/tomcat-users.xml /opt/tomcat/conf/tomcat-users.xml
+
+RUN mkdir -p /opt/fcrepo/data/objects
+RUN mkdir -p /opt/fcrepo/config
+RUN chown -R tomcat:tomcat /opt/fcrepo
+
+ENV FCREPO_WAR_URL https://github.com/fcrepo/fcrepo/releases/download/fcrepo-6.2.0/fcrepo-webapp-6.2.0.war
+RUN wget -O fcrepo.war $FCREPO_WAR_URL
+RUN mv fcrepo.war /opt/tomcat/webapps
+RUN chown tomcat:tomcat /opt/tomcat/webapps/fcrepo.war
+
+
+ENTRYPOINT /opt/tomcat/bin/catalina.sh run

docker-compose.yml

@@ -1,3 +1,5 @@
+volumes:
+  solr:
 version: "2.4"
 services:
   db:
@@ -16,3 +18,34 @@ services:
     restart: always
     ports: 
       - 8888:80
+  phpmyadmin:
+    image: phpmyadmin
+    restart: always
+    ports:
+      - 8889:80
+    environment: 
+      - PMA_HOST=db
+  solr:
+    image: solr:5.5
+    #build:
+    #  context: .
+    #  dockerfile: Solr.Dockerfile
+    volumes:
+      - solr:/opt/solr/server/solr
+    restart: always
+    ports:
+      - 8887:8983
+  tomcat:
+    build:
+      context: .
+      dockerfile: Tomcat.Dockerfile
+    restart: always
+    ports:
+      - 8886:8080
+  pg:
+    image: postgres:15
+    restart: always
+    environment:
+      - POSTGRES_DB=fedora
+      - POSTGRES_USER=fedora
+      - POSTGRES_PASSWORD=fedora

fcrepo/allowed_hosts.txt

@@ -0,0 +1 @@
+http://CRAYFISH_HOST:CRAYFISH_PORT/

fcrepo/fcrepo-config.xml

@@ -0,0 +1,88 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<beans xmlns="http://www.springframework.org/schema/beans"
+    xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+    xmlns:context="http://www.springframework.org/schema/context"
+    xmlns:task="http://www.springframework.org/schema/task"
+    xmlns:p="http://www.springframework.org/schema/p"
+    xmlns:util="http://www.springframework.org/schema/util"
+    xsi:schemaLocation="
+    http://www.springframework.org/schema/beans http://www.springframework.org/schema/beans/spring-beans.xsd
+    http://www.springframework.org/schema/context http://www.springframework.org/schema/context/spring-context.xsd
+    http://www.springframework.org/schema/task http://www.springframework.org/schema/task/spring-task.xsd
+    http://www.springframework.org/schema/util http://www.springframework.org/schema/util/spring-util.xsd">
+
+    <context:property-placeholder/>
+    <context:annotation-config/>
+    <context:component-scan base-package="org.fcrepo"/>
+
+    <bean name="modeshapeRepofactory"
+        class="org.fcrepo.kernel.modeshape.spring.ModeShapeRepositoryFactoryBean"
+        p:repositoryConfiguration="file:///opt/fcrepo/config/repository.json"
+        depends-on="authenticationProvider"/>
+    <bean name="authenticationProvider" class="org.fcrepo.auth.common.ShiroAuthenticationProvider"/>
+    <bean name="headerProvider" class="org.fcrepo.auth.common.HttpHeaderPrincipalProvider">
+        <property name="headerName" value="X-Islandora"/>
+        <property name="separator" value=","/>
+    </bean>
+    <bean name="delegatedPrincipalProvider" class="org.fcrepo.auth.common.DelegateHeaderPrincipalProvider"/>
+    <bean name="accessRolesProvider" class="org.fcrepo.auth.webac.WebACRolesProvider"/>
+    <bean id="webACAuthorizingRealm" class="org.fcrepo.auth.webac.WebACAuthorizingRealm" />
+    <bean id="servletContainerAuthenticatingRealm" class="org.fcrepo.auth.common.ServletContainerAuthenticatingRealm" />
+    <bean id="securityManager" class="org.apache.shiro.web.mgt.DefaultWebSecurityManager">
+      <property name="realms">
+        <util:set set-class="java.util.HashSet">
+          <ref bean="webACAuthorizingRealm"/>
+          <ref bean="servletContainerAuthenticatingRealm"/>
+        </util:set>
+      </property>
+    </bean>
+    <bean id="lifecycleBeanPostProcessor" class="org.apache.shiro.spring.LifecycleBeanPostProcessor"/>
+    <bean id="servletContainerAuthFilter" class="org.fcrepo.auth.common.ServletContainerAuthFilter"/>
+    <bean id="webACFilter" class="org.fcrepo.auth.webac.WebACFilter"/>
+    <bean id="shiroFilter" class="org.apache.shiro.spring.web.ShiroFilterFactoryBean">
+      <property name="securityManager" ref="securityManager"/>
+      <property name="filterChainDefinitions">
+        <value>
+          /** = servletContainerAuthFilter,headerProvider,delegatedPrincipalProvider,webACFilter
+        </value>
+      </property>
+    </bean>
+
+    <util:list id="translationChain" value-type="org.fcrepo.kernel.api.identifiers.InternalIdentifierConverter">
+        <bean class="org.fcrepo.kernel.modeshape.identifiers.HashConverter"/>
+        <bean class="org.fcrepo.kernel.modeshape.identifiers.NamespaceConverter"/>
+    </util:list>
+
+    <bean class="org.fcrepo.jms.JMSTopicPublisher">
+      <constructor-arg value="fedora"/>
+    </bean>
+    <bean id="connectionFactory"
+        class="org.apache.activemq.ActiveMQConnectionFactory" depends-on="jmsBroker"
+        p:brokerURL="vm://${fcrepo.jms.host:localhost}:${fcrepo.dynamic.jms.port:61616}?create=false"/>
+    <bean name="jmsBroker" class="org.apache.activemq.xbean.BrokerFactoryBean"
+      p:config="${fcrepo.activemq.configuration:classpath:/config/activemq.xml}" p:start="true"/>
+    <bean class="org.fcrepo.jms.DefaultMessageFactory"/>
+    <bean class="org.fcrepo.kernel.modeshape.observer.SimpleObserver"/>
+    <bean name="fedoraEventFilter" class="org.fcrepo.kernel.modeshape.observer.DefaultFilter"/>
+    <bean name="fedoraEventMapper" class="org.fcrepo.kernel.modeshape.observer.eventmappings.AllNodeEventsOneEvent"/>
+    <bean name="fedoraInternalEventBus" class="com.google.common.eventbus.EventBus"/>
+    <bean name="rdfNamespaceRegistry" class="org.fcrepo.kernel.api.rdf.RdfNamespaceRegistry"
+        init-method="init" destroy-method="shutdown">
+      <property name="configPath" value="${fcrepo.namespace.registry:classpath:/namespaces.yml}" />
+      <property name="monitorForChanges" value="true" />
+    </bean>
+    <bean name="externalContentPathValidator" class="org.fcrepo.http.api.ExternalContentPathValidator"
+        init-method="init" destroy-method="shutdown">
+        <property name="configPath" value="${fcrepo.external.content.allowed:#{null}}" />
+        <property name="monitorForChanges" value="true" />
+    </bean>
+    <bean name="externalContentHandlerFactory" class="org.fcrepo.http.api.ExternalContentHandlerFactory">
+        <property name="validator" ref="externalContentPathValidator" />
+    </bean>
+    <task:scheduler id="taskScheduler" />
+    <task:executor id="taskExecutor" pool-size="1" />
+    <task:annotation-driven executor="taskExecutor" scheduler="taskScheduler" />
+    <bean class="org.modeshape.jcr.ModeShapeEngine" init-method="start"/>
+    <bean id="connectionManager" class="org.apache.http.impl.conn.PoolingHttpClientConnectionManager" />
+    <bean class="org.fcrepo.http.commons.session.SessionFactory"/>
+</beans>

fcrepo/i8_namespaces.cnd

@@ -0,0 +1,31 @@
+<acl = 'http://www.w3.org/ns/auth/acl#'>
+<bf = 'http://id.loc.gov/ontologies/bibframe/'>
+<cc = 'http://creativecommons.org/ns#'>
+<dcterms = 'http://purl.org/dc/terms/'>
+<dwc = 'http://rs.tdwg.org/dwc/terms/'>
+<exif = 'http://www.w3.org/2003/12/exif/ns#'>
+<fedoramodel = 'info:fedora/fedora-system:def/model#'>
+<geo = 'http://www.w3.org/2003/01/geo/wgs84_pos#'>
+<gn = 'http://www.geonames.org/ontology#'>
+<iana = 'http://www.iana.org/assignments/relation/'>
+<islandorarelsext = 'http://islandora.ca/ontology/relsext#'>
+<islandorarelsint = 'http://islandora.ca/ontology/relsint#'>
+<ldp = 'http://www.w3.org/ns/ldp#'>
+<nfo = 'http://www.semanticdesktop.org/ontologies/2007/03/22/nfo#'>
+<ore = 'http://www.openarchives.org/ore/terms/'>
+<owl = 'http://www.w3.org/2002/07/owl#'>
+<pcdm = 'http://pcdm.org/models#'>
+<pcdmfmt = 'http://pcdm.org/file-format-types#'>
+<pcdmrts = 'http://pcdm.org/rights#'>
+<pcdmuse = 'http://pcdm.org/use#'>
+<pcdmwrks = 'http://pcdm.org/works#'>
+<prov = 'http://www.w3.org/ns/prov#'>
+<rdf = 'http://www.w3.org/1999/02/22-rdf-syntax-ns#'>
+<rdfs = 'http://www.w3.org/2000/01/rdf-schema#'>
+<rel = 'http://id.loc.gov/vocabulary/relators/'>
+<schema = 'http://schema.org/'>
+<skos = 'http://www.w3.org/2004/02/skos/core#'>
+<xml = 'http://www.w3.org/XML/1998/namespace'>
+<xmlns = 'http://www.w3.org/2000/xmlns/'>
+<xs = 'http://www.w3.org/2001/XMLSchema'>
+<xsi = 'http://www.w3.org/2001/XMLSchema-instance'>

fcrepo/repository.json

@@ -0,0 +1,39 @@
+{
+    "name" : "repo",
+    "jndiName" : "",
+    "workspaces" : {
+        "predefined" : ["default"],
+        "default" : "default",
+        "allowCreation" : true,
+        "cacheSize" : 10000
+    },
+    "storage" : {
+        "persistence": {
+            "type" : "db",
+            "connectionUrl": "jdbc:postgresql://pg:5432/fedora",
+            "driver" : "org.postgresql.Driver",
+            "username" : "fedora",
+            "password" : "fedora"
+        },
+        "binaryStorage" : {
+            "type" : "file",
+            "directory" : "/opt/fcrepo/data/binaries",
+            "minimumBinarySizeInBytes" : 4096
+        }
+    },
+    "security" : {
+        "anonymous" : {
+            "roles" : ["readonly","readwrite","admin"],
+            "useOnFailedLogin" : false
+        },
+        "providers" : [
+            { "classname" : "org.fcrepo.auth.common.BypassSecurityServletAuthenticationProvider" }
+        ]
+    },
+    "garbageCollection" : {
+        "threadPool" : "modeshape-gc",
+        "initialTime" : "00:00",
+        "intervalInHours" : 24
+    },
+    "node-types" : ["fedora-node-types.cnd", "file:/opt/fcrepo/config/i8_namespaces.cnd"]
+}

fcrepo/setenv.sh

@@ -0,0 +1,4 @@
+export CATALINA_HOME="/opt/tomcat"
+export JAVA_HOME="/usr/lib/jvm/java-11-openjdk-amd64"
+#export JAVA_OPTS="-Djava.awt.headless=true -server -Xmx1500m -Xms1000m"
+export JAVA_OPTS="-Djava.awt.headless=true -Dfcrepo.home=/otp/fcrepo/data -Dfcrepo.velocity.runtime.log=/opt/tomcat/logs/velocity.log -Dfcrepo.jms.baseUrl=http://localhost:8080/fcrepo/rest -Dfcrepo.autoversioning.enabled=false -DconnectionTimeout=-1 -Dfcrepo.db.url=jdbc:postgresql://pg:5432/fedora -Dfcrepo.db.user=fedora -Dfcrepo.db.password=fedora -server -Xmx1500m -Xms1000m"

fcrepo/tomcat-users.xml

@@ -0,0 +1,12 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<tomcat-users xmlns="http://tomcat.apache.org/xml"
+              xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance"
+              xsi:schemaLocation="http://tomcat.apache.org/xml tomcat-users.xsd"
+              version="1.0">
+  <role rolename="tomcat"/>
+  <role rolename="fedoraAdmin"/>
+  <role rolename="fedoraUser"/>
+  <user username="tomcat" password="islandora" roles="tomcat"/>
+  <user username="fedoraAdmin" password="islandora" roles="fedoraAdmin"/>
+  <user username="fedoraUser" password="islandora" roles="fedoraUser"/>
+</tomcat-users>

fcrepo/tomcat.service

@@ -0,0 +1,11 @@
+[Unit]
+Description=Tomcat
+
+[Service]
+Type=forking
+ExecStart=/opt/tomcat/bin/startup.sh
+ExecStop=/opt/tomcat/bin/shutdown.sh
+SyslogIdentifier=tomcat
+
+[Install]
+WantedBy=multi-user.target